yyzE [2019-08-26 11:45:49]

similar to [category|SW 1.2.2|PTS], EIIA component (truncated)

locus: BSU_40120

pI: 5.04

mw: 8.11 kDa

protein length: 76 aa

gene length: 231 bp

function: unknown

product: unknown

essential: no

synonyms

Genomic Context

categories

• [category|SW 1|Cellular processes] → [category|SW 1.2|Transporters] → [category|SW 1.2.2|Phosphotransferase system] → [category|SW 1.2.2.2|Sugar specific PTS proteins]
• [category|SW 6|Groups of genes] → [category|SW 6.4|Phosphoproteins] → [category|SW 6.4.4|Phosphorylation on a His residue]

Gene

Coordinates: 4,122,619 → 4,122,849

The protein

Protein family

• [category|SW 1.2.2|PTS] permease, glucose family [Pubmed|10627040]

Structure

• [PDB|1AX3] (IIA domain of [protein|B5E7EB475434E96786C577AE709A21BD702733D8|PtsG], 44% identity) [pubmed|9593197]

Expression and Regulation

Operons

• genes: [gene|FF3C9A092A3CAE0EB808F9C615BF5FC433C17E81|yyzE]-[gene|6A06E0E3017DB6E75D5C1114D954D51CED546051|bglA]
  description: [pubmed|22383849]

Biological materials

Mutant

• BKE40120 (Δ[gene|FF3C9A092A3CAE0EB808F9C615BF5FC433C17E81|yyzE]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE40120 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGACAACCGTAATGACGC, downstream forward: _UP4_GTCGTAAGCTGAGGAGGAAT
• BKK40120 (Δ[gene|FF3C9A092A3CAE0EB808F9C615BF5FC433C17E81|yyzE]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK40120 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGACAACCGTAATGACGC, downstream forward: _UP4_GTCGTAAGCTGAGGAGGAAT

References

• 10627040,9593197